Gene: CARMN
Basic information
LNCipedia gene ID: CARMN
Location (hg19): chr5:148786252-148812512
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA_gene
Transcripts: 42
Transcripts
| Transcript ID | Location (hg19) | Length |
|---|---|---|
| CARMN:1 | chr5:148786252-148803960 | 555 bp |
| CARMN:10 | chr5:148786441-148805957 | 3148 bp |
| CARMN:11 | chr5:148786441-148808237 | 3950 bp |
| CARMN:12 | chr5:148786442-148808241 | 8398 bp |
| CARMN:13 | chr5:148786476-148804999 | 782 bp |
| CARMN:14 | chr5:148786479-148805225 | 1158 bp |
| CARMN:15 | chr5:148786526-148804027 | 612 bp |
| CARMN:16 | chr5:148786526-148793644 | 5115 bp |
| CARMN:17 | chr5:148786526-148793660 | 5131 bp |
| CARMN:18 | chr5:148786527-148803902 | 550 bp |
| CARMN:19 | chr5:148786527-148800500 | 572 bp |
| CARMN:2 | chr5:148786396-148803987 | 536 bp |
| CARMN:20 | chr5:148786527-148801504 | 576 bp |
| CARMN:21 | chr5:148786527-148803944 | 592 bp |
| CARMN:22 | chr5:148786808-148792331 | 5524 bp |
| CARMN:23 | chr5:148800890-148806264 | 2312 bp |
| CARMN:24 | chr5:148801041-148806264 | 2736 bp |
| CARMN:25 | chr5:148802168-148805800 | 2360 bp |
| CARMN:26 | chr5:148802862-148805800 | 1790 bp |
| CARMN:27 | chr5:148809849-148812397 | 2549 bp |
| CARMN:28 | chr5:148786441-148801189 | 411 bp |
| CARMN:29 | chr5:148786441-148808241 | 8399 bp |
| CARMN:3 | chr5:148786408-148812399 | 939 bp |
| CARMN:30 | chr5:148786441-148805225 | 1196 bp |
| CARMN:31 | chr5:148786441-148808237 | 3950 bp |
| CARMN:32 | chr5:148786441-148810190 | 6860 bp |
| CARMN:33 | chr5:148786441-148810190 | 6924 bp |
| CARMN:34 | chr5:148786441-148812512 | 4697 bp |
| CARMN:35 | chr5:148786441-148812512 | 8689 bp |
| CARMN:36 | chr5:148786443-148812398 | 2706 bp |
| CARMN:37 | chr5:148786526-148793660 | 5131 bp |
| CARMN:38 | chr5:148786526-148800500 | 573 bp |
| CARMN:39 | chr5:148786526-148801504 | 577 bp |
| CARMN:4 | chr5:148786408-148812399 | 1003 bp |
| CARMN:40 | chr5:148786526-148803902 | 551 bp |
| CARMN:41 | chr5:148786526-148804027 | 612 bp |
| CARMN:42 | chr5:148786526-148812512 | 7369 bp |
| CARMN:5 | chr5:148786440-148808237 | 8396 bp |
| CARMN:6 | chr5:148786440-148812399 | 9070 bp |
| CARMN:7 | chr5:148786440-148812399 | 9591 bp |
| CARMN:8 | chr5:148786440-148805225 | 1197 bp |
| CARMN:9 | chr5:148786441-148801189 | 411 bp |
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| CARMN | no | no | no | no |
Available literature
- Du (2016), Negative feedback circuitry between MIR143HG and RBM24 in Hirschsprung disease., Biochim. Biophys. Acta
- Ellinger (2015), The long non-coding RNA lnc-ZNF180-2 is a prognostic biomarker in patients with clear cell renal cell carcinoma., Am J Cancer Res
- Ounzain (2015), CARMEN, a human super enhancer-associated long noncoding RNA controlling cardiac specification, differentiation and homeostasis., J. Mol. Cell. Cardiol.