LNCipedia

Gene: CARMN

Basic information

LNCipedia gene ID: CARMN
Location (hg19): chr5:148786252-148812512
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA_gene
Transcripts: 42

Transcripts

Transcript ID	Location (hg19)	Length
CARMN:1	chr5:148786252-148803960	555 bp
CARMN:10	chr5:148786441-148805957	3148 bp
CARMN:11	chr5:148786441-148808237	3950 bp
CARMN:12	chr5:148786442-148808241	8398 bp
CARMN:13	chr5:148786476-148804999	782 bp
CARMN:14	chr5:148786479-148805225	1158 bp
CARMN:15	chr5:148786526-148804027	612 bp
CARMN:16	chr5:148786526-148793644	5115 bp
CARMN:17	chr5:148786526-148793660	5131 bp
CARMN:18	chr5:148786527-148803902	550 bp
CARMN:19	chr5:148786527-148800500	572 bp
CARMN:2	chr5:148786396-148803987	536 bp
CARMN:20	chr5:148786527-148801504	576 bp
CARMN:21	chr5:148786527-148803944	592 bp
CARMN:22	chr5:148786808-148792331	5524 bp
CARMN:23	chr5:148800890-148806264	2312 bp
CARMN:24	chr5:148801041-148806264	2736 bp
CARMN:25	chr5:148802168-148805800	2360 bp
CARMN:26	chr5:148802862-148805800	1790 bp
CARMN:27	chr5:148809849-148812397	2549 bp
CARMN:28	chr5:148786441-148801189	411 bp
CARMN:29	chr5:148786441-148808241	8399 bp
CARMN:3	chr5:148786408-148812399	939 bp
CARMN:30	chr5:148786441-148805225	1196 bp
CARMN:31	chr5:148786441-148808237	3950 bp
CARMN:32	chr5:148786441-148810190	6860 bp
CARMN:33	chr5:148786441-148810190	6924 bp
CARMN:34	chr5:148786441-148812512	4697 bp
CARMN:35	chr5:148786441-148812512	8689 bp
CARMN:36	chr5:148786443-148812398	2706 bp
CARMN:37	chr5:148786526-148793660	5131 bp
CARMN:38	chr5:148786526-148800500	573 bp
CARMN:39	chr5:148786526-148801504	577 bp
CARMN:4	chr5:148786408-148812399	1003 bp
CARMN:40	chr5:148786526-148803902	551 bp
CARMN:41	chr5:148786526-148804027	612 bp
CARMN:42	chr5:148786526-148812512	7369 bp
CARMN:5	chr5:148786440-148808237	8396 bp
CARMN:6	chr5:148786440-148812399	9070 bp
CARMN:7	chr5:148786440-148812399	9591 bp
CARMN:8	chr5:148786440-148805225	1197 bp
CARMN:9	chr5:148786441-148801189	411 bp

Locus conservation

Locus conservation?
CARMN	no	no	no	no

Available literature

Du (2016), Negative feedback circuitry between MIR143HG and RBM24 in Hirschsprung disease., Biochim. Biophys. Acta
Ellinger (2015), The long non-coding RNA lnc-ZNF180-2 is a prognostic biomarker in patients with clear cell renal cell carcinoma., Am J Cancer Res
Ounzain (2015), CARMEN, a human super enhancer-associated long noncoding RNA controlling cardiac specification, differentiation and homeostasis., J. Mol. Cell. Cardiol.